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docs/build/html/_static/scripts/furo-extensions.js
docs/build/html/_static/scripts/furo.js
docs/build/html/_static/scripts/furo.js.LICENSE.txt
docs/build/html/_static/scripts/furo.js.map
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docs/source/classes.rst
docs/source/conf.py
docs/source/index.rst
docs/source/modules.rst
docs/source/_autosummary/tropea_clustering.OnionMulti.rst
docs/source/_autosummary/tropea_clustering.OnionMultiSmooth.rst
docs/source/_autosummary/tropea_clustering.OnionUni.rst
docs/source/_autosummary/tropea_clustering.OnionUniSmooth.rst
docs/source/_autosummary/tropea_clustering._internal.onion_smooth.first_classes.StateMulti.rst
docs/source/_autosummary/tropea_clustering._internal.onion_smooth.first_classes.StateUni.rst
docs/source/_autosummary/tropea_clustering.helpers.reshape_from_dnt.rst
docs/source/_autosummary/tropea_clustering.helpers.reshape_from_nt.rst
docs/source/_autosummary/tropea_clustering.helpers.rst
docs/source/_autosummary/tropea_clustering.onion_multi.rst
docs/source/_autosummary/tropea_clustering.onion_multi_smooth.rst
docs/source/_autosummary/tropea_clustering.onion_uni.rst
docs/source/_autosummary/tropea_clustering.onion_uni_smooth.rst
docs/source/_autosummary/tropea_clustering.plot.color_trj_from_xyz.rst
docs/source/_autosummary/tropea_clustering.plot.plot_medoids_multi.rst
docs/source/_autosummary/tropea_clustering.plot.plot_medoids_uni.rst
docs/source/_autosummary/tropea_clustering.plot.plot_one_trj_multi.rst
docs/source/_autosummary/tropea_clustering.plot.plot_one_trj_uni.rst
docs/source/_autosummary/tropea_clustering.plot.plot_output_multi.rst
docs/source/_autosummary/tropea_clustering.plot.plot_output_uni.rst
docs/source/_autosummary/tropea_clustering.plot.plot_pop_fractions.rst
docs/source/_autosummary/tropea_clustering.plot.plot_sankey.rst
docs/source/_autosummary/tropea_clustering.plot.plot_state_populations.rst
docs/source/_autosummary/tropea_clustering.plot.plot_time_res_analysis.rst
docs/source/_autosummary/tropea_clustering.plot.rst
docs/source/_autosummary/tropea_clustering.plot_smooth.color_trj_from_xyz.rst
docs/source/_autosummary/tropea_clustering.plot_smooth.plot_one_trj_multi.rst
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docs/source/_autosummary/tropea_clustering.plot_smooth.plot_pop_fractions.rst
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docs/source/_autosummary/tropea_clustering.plot_smooth.plot_state_populations.rst
docs/source/_autosummary/tropea_clustering.plot_smooth.plot_time_res_analysis.rst
docs/source/_autosummary/tropea_clustering.plot_smooth.rst
docs/source/_autosummary/tropea_clustering.rst
docs/source/_static/images/multi_Fig1.png
docs/source/_static/images/multi_Fig2.png
docs/source/_static/images/uni_Fig1.png
docs/source/_static/images/uni_Fig2.png
docs/source/_static/images/uni_Fig3.png
docs/source/_static/images/uni_Fig4.png
docs/source/_static/images/uni_Fig5.png
docs/source/_static/images/uni_Fig6.png
docs/source/_static/images/uni_Fig7.png
docs/source/_templates/class.rst
docs/source/_templates/module.rst
examples/ex1_gaussian_states.py
examples/ex2_water-ice_coex.py
examples/ex3_params_effect.py
examples/ex1_gaussian_states/Fig1.png
examples/ex1_gaussian_states/Fig10.png
examples/ex1_gaussian_states/Fig2.png
examples/ex1_gaussian_states/Fig3.png
examples/ex1_gaussian_states/Fig4.png
examples/ex1_gaussian_states/Fig5.png
examples/ex1_gaussian_states/Fig6.png
examples/ex1_gaussian_states/Fig7.png
examples/ex1_gaussian_states/Fig8.png
examples/ex1_gaussian_states/Fig9.png
examples/ex2_water-ice_coex/Fig1.png
examples/ex2_water-ice_coex/Fig2.png
examples/ex2_water-ice_coex/Fig3.png
examples/ex2_water-ice_coex/Fig4.png
examples/ex2_water-ice_coex/Fig5.png
examples/ex2_water-ice_coex/Fig6.png
examples/ex3_params_effect/delta_t_1.png
examples/ex3_params_effect/delta_t_2.png
examples/ex3_params_effect/nos.png
src/tropea_clustering/__init__.py
src/tropea_clustering/helpers.py
src/tropea_clustering/plot.py
src/tropea_clustering/plot_smooth.py
src/tropea_clustering.egg-info/PKG-INFO
src/tropea_clustering.egg-info/SOURCES.txt
src/tropea_clustering.egg-info/dependency_links.txt
src/tropea_clustering.egg-info/requires.txt
src/tropea_clustering.egg-info/top_level.txt
src/tropea_clustering/_internal/utilities.py
src/tropea_clustering/_internal/onion_old/classes.py
src/tropea_clustering/_internal/onion_old/first_classes.py
src/tropea_clustering/_internal/onion_old/functions.py
src/tropea_clustering/_internal/onion_old/main.py
src/tropea_clustering/_internal/onion_old/main_2d.py
src/tropea_clustering/_internal/onion_old/onion_multi.py
src/tropea_clustering/_internal/onion_old/onion_uni.py
src/tropea_clustering/_internal/onion_old/plot.py
src/tropea_clustering/_internal/onion_old/__pycache__/classes.cpython-313.pyc
src/tropea_clustering/_internal/onion_old/__pycache__/first_classes.cpython-313.pyc
src/tropea_clustering/_internal/onion_old/__pycache__/functions.cpython-313.pyc
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src/tropea_clustering/_internal/onion_old/__pycache__/onion_uni.cpython-313.pyc
src/tropea_clustering/_internal/onion_old/__pycache__/plot.cpython-313.pyc
src/tropea_clustering/_internal/onion_smooth/first_classes.py
src/tropea_clustering/_internal/onion_smooth/functions.py
src/tropea_clustering/_internal/onion_smooth/main.py
src/tropea_clustering/_internal/onion_smooth/main_2d.py
src/tropea_clustering/_internal/onion_smooth/onion_multi.py
src/tropea_clustering/_internal/onion_smooth/onion_uni.py
src/tropea_clustering/_internal/onion_smooth/plot.py
src/tropea_clustering/_internal/onion_smooth/__pycache__/first_classes.cpython-313.pyc
src/tropea_clustering/_internal/onion_smooth/__pycache__/functions.cpython-313.pyc
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src/tropea_clustering/_internal/onion_smooth/__pycache__/onion_multi.cpython-313.pyc
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src/tropea_clustering/_internal/onion_smooth/__pycache__/plot.cpython-313.pyc
test/__init__.py
test/test_multi.py
test/test_multi_smooth.py
test/test_plot.py
test/test_plot_smooth.py
test/test_uni.py
test/test_uni_smooth.py
test/output_multi/labels.npy
test/output_multi/labels_3D.npy
test/output_multi_smooth/labels.npy
test/output_multi_smooth/labels_3D.npy
test/output_uni/labels.npy
test/output_uni_smooth/labels.npy