Metadata-Version: 2.3
Name: basebio
Version: 0.4.7
Summary: 
Author: DeYing Zhang
Author-email: legendzdy@dingtalk.com
Requires-Python: >=3.10
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Requires-Dist: pyyaml (>=6.0.2)
Requires-Dist: retrying (>=1.3.4)
Requires-Dist: sqlalchemy (>=2.0.40)
Requires-Dist: typer (>=0.15.2)
Description-Content-Type: text/markdown

# BaseBio

This is a Python package for bioinformatics.

# Table of Contents

<!-- TOC -->

- [BaseBio](#basebio)
- [Table of Contents](#table-of-contents)
- [Overview](#overview)
- [Requirements](#requirements)
- [basebio modules](#basebio-modules)

<!-- /TOC -->

# Overview

BaseBio is a Python package for bioinformatics. It provides a set of modules for running any shell command with a common function and recode of the original program monitor code in postgreSQL.

# Requirements

1. Python 3.8+
2. Python modules:
    - typer (>=0.15.2,<0.16.0)
    - sqlalchemy (>=2.0.40,<3.0.0)
    - retrying (>=1.3.4,<2.0.0)

# basebio modules

basebio includes the following sub-modules:
- cmd
- db
