antlr4-python3-runtime~=4.9.3
dacite
filelock>=3.13.1
fsspec>=2023.12.2
hydra-core~=1.3.2
importlib-metadata~=7.0.1
jinja2~=3.1.3
mpmath~=1.3.0
networkx>=3.1
numpy<2.0,>=1.12.0
omegaconf~=2.3.0
packaging>=23.2
pandas>=2.0
pillow~=10.2.0
pybigwig>=0.3.22
pyfaidx>=0.8.1.1
pysam>=0.22.0
python-dateutil~=2.8.2
pytz~=2023.3.post1
pyyaml~=6.0.1
scipy>=1.10.0
six~=1.16.0
sympy~=1.12
torch==2.1.2
torchaudio==2.1.2
torchinfo~=1.8.0
torchmetrics
torchvision==0.16.2
tqdm>=4.66.1
tzdata~=2023.4
zipp~=3.17.0

[dev]
pre-commit
pytest
pytest-xdist
