#idx target name            accession query name           accession clan name mdl mdl from   mdl to seq from   seq to strand trunc pass   gc  bias  score   E-value inc olp anyidx afrct1 afrct2 winidx wfrct1 wfrct2 description of target
#--- ---------------------- --------- -------------------- --------- --------- --- -------- -------- -------- -------- ------ ----- ---- ---- ----- ------ --------- --- --- ------ ------ ------ ------ ------ ------ ---------------------
1    LSU_rRNA_archaea       RF02540   NC_013790.1          -         CL00112    cm        1     2990   762872   765862      +    no    1 0.49  45.1 2763.5         0  !   ^       -      -      -      -      -      - -
2    LSU_rRNA_archaea       RF02540   NC_013790.1          -         CL00112    cm        1     2990  2041329  2038338      -    no    1 0.48  46.1 2755.0         0  !   ^       -      -      -      -      -      - -
3    LSU_rRNA_bacteria      RF02541   NC_013790.1          -         CL00112    cm        1     2925   762874   765862      +    no    1 0.49  45.1 1872.9         0  !   =       1  1.000  0.999      "      "      " -
4    LSU_rRNA_bacteria      RF02541   NC_013790.1          -         CL00112    cm        1     2925  2041327  2038338      -    no    1 0.48  46.2 1865.5         0  !   =       2  1.000  0.999      "      "      " -
5    LSU_rRNA_eukarya       RF02543   NC_013790.1          -         CL00112    cm        1     3401   763018   765851      +    no    1 0.49  41.5 1581.3         0  !   =       1  1.000  0.948      "      "      " -
6    LSU_rRNA_eukarya       RF02543   NC_013790.1          -         CL00112    cm        1     3401  2041183  2038349      -    no    1 0.49  42.3 1572.1         0  !   =       2  1.000  0.948      "      "      " -
7    SSU_rRNA_archaea       RF01959   NC_013790.1          -         CL00111    cm        1     1477  2043361  2041888      -    no    1 0.53   4.1 1552.0         0  !   ^       -      -      -      -      -      - -
8    SSU_rRNA_archaea       RF01959   NC_013790.1          -         CL00111    cm        1     1477   760878   762351      +    no    1 0.54   4.1 1546.5         0  !   ^       -      -      -      -      -      - -
9    SSU_rRNA_bacteria      RF00177   NC_013790.1          -         CL00111    cm        1     1533  2043366  2041886      -    no    1 0.53   3.7 1161.9         0  !   =       7  0.995  1.000      "      "      " -
10   SSU_rRNA_bacteria      RF00177   NC_013790.1          -         CL00111    cm        1     1533   760873   762353      +    no    1 0.53   3.7 1156.4         0  !   =       8  0.995  1.000      "      "      " -
11   SSU_rRNA_eukarya       RF01960   NC_013790.1          -         CL00111    cm        1     1851  2043361  2041891      -    no    1 0.53   4.6  970.4  9.9e-293  !   =       7  1.000  0.998      "      "      " -
12   SSU_rRNA_eukarya       RF01960   NC_013790.1          -         CL00111    cm        1     1851   760878   762348      +    no    1 0.54   4.5  963.8  9.9e-291  !   =       8  1.000  0.998      "      "      " -
13   SSU_rRNA_microsporidia RF02542   NC_013790.1          -         CL00111    cm        1     1312  2043361  2041891      -    no    1 0.53   4.6  919.9  7.7e-281  !   =       7  1.000  0.998      "      "      " -
14   SSU_rRNA_microsporidia RF02542   NC_013790.1          -         CL00111    cm        1     1312   760878   762348      +    no    1 0.54   4.5  917.2  5.4e-280  !   =       8  1.000  0.998      "      "      " -
15   RNaseP_arch            RF00373   NC_013790.1          -         CL00002    cm        1      303  2614544  2614262      -    no    1 0.43   0.0  184.9   1.1e-53  !   *       -      -      -      -      -      - -
16   Archaea_SRP            RF01857   NC_013790.1          -         CL00003    cm        1      318  1064321  1064634      +    no    1 0.44   0.1  197.6   6.9e-49  !   *       -      -      -      -      -      - -
17   FMN                    RF00050   NC_013790.1          -         -          cm        1      140   193975   193837      -    no    1 0.42   0.0  115.2   6.8e-28  !   *       -      -      -      -      -      - -
18   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71   735136   735208      +    no    1 0.59   0.0   72.1   4.9e-16  !   *       -      -      -      -      -      - -
19   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2350593  2350520      -    no    1 0.66   0.0   71.0     1e-15  !   *       -      -      -      -      -      - -
20   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2680310  2680384      +    no    1 0.52   0.0   70.9   1.1e-15  !   *       -      -      -      -      -      - -
21   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2351254  2351181      -    no    1 0.62   0.0   69.7   2.2e-15  !   *       -      -      -      -      -      - -
22   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71   361676   361604      -    no    1 0.51   0.0   69.5   2.5e-15  !   *       -      -      -      -      -      - -
23   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2585265  2585193      -    no    1 0.60   0.0   69.2   3.2e-15  !   *       -      -      -      -      -      - -
24   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2585187  2585114      -    no    1 0.59   0.0   68.8   3.9e-15  !   *       -      -      -      -      -      - -
25   tRNA                   RF00005   NC_013790.1          -         CL00001    cm        1       71  2680159  2680233      +    no    1 0.67   0.0   68.7   4.3e-15  !   *       -      -      -      -      -      - -
