Results of data analysis
Performed on the 'BIGDAWG_SynthControl_Data.pop' file at: 


Population Summary
==================

Population Totals
_________________
Sample Size (n): 1002
Allele Count (2n): 2004
Total loci in file: 3 [A, DRB1, DQB1]
Total loci with data: 3 [A, DRB1, DQB1]


Legend for all analyses
_______________________

    * = significant at the 5% level
   ** = significant at the 1% level
  *** = significant at the 0.1% level
 **** = significant at the 0.01% level
***** = significant at the 0.001% level
   

I. Single Locus Analyses
========================

1. Locus: A
___________

1.1. Allele Counts [A]
----------------------
Untyped individuals: 0.0
Sample Size (n): 1002.0
Allele Count (2n): 2004
Distinct alleles (k): 18

Counts ordered by frequen| Counts ordered by name   
Name   Frequency (Count) | Name   Frequency (Count) 
03:01P 0.12625   253     | 01:01P 0.08283   166     
24:02P 0.10729   215     | 02:01P 0.02894   58      
32:02  0.10130   203     | 02:05P 0.07086   142     
68:06  0.08433   169     | 03:01P 0.12625   253     
01:01P 0.08283   166     | 11:01P 0.05888   118     
02:05P 0.07086   142     | 23:01P 0.02246   45      
11:01P 0.05888   118     | 24:02P 0.10729   215     
26:08  0.05539   111     | 25:01P 0.01896   38      
29:02P 0.05389   108     | 26:01P 0.04790   96      
31:01P 0.05240   105     | 26:08  0.05539   111     
26:01P 0.04790   96      | 29:01P 0.02894   58      
68:01P 0.03992   80      | 29:02P 0.05389   108     
02:01P 0.02894   58      | 31:01P 0.05240   105     
29:01P 0.02894   58      | 32:01P 0.01497   30      
23:01P 0.02246   45      | 32:02  0.10130   203     
25:01P 0.01896   38      | 33:01P 0.00449   9       
32:01P 0.01497   30      | 68:01P 0.03992   80      
33:01P 0.00449   9       | 68:06  0.08433   169     
Total  1.00000   2004    | Total  1.00000   2004    


1.2. HardyWeinberg [A]
----------------------
Table of genotypes, format of each cell is: observed/expected.

01:01P    7/6.9
02:01P    5/4.8    1/0.8
02:05P  11/11.8    4/4.1    5/5.0
03:01P  21/21.0    7/7.3  18/17.9  16/16.0
11:01P   10/9.8    4/3.4    8/8.4  14/14.9    4/3.5
23:01P    4/3.7    1/1.3    3/3.2    5/5.7    2/2.6    1/0.5
24:02P  18/17.8    6/6.2  15/15.2  27/27.1  14/12.7    5/4.8  11/11.5
25:01P    3/3.1    1/1.1    3/2.7    5/4.8    2/2.2    1/0.9    4/4.1
26:01P    8/8.0    3/2.8    7/6.8  12/12.1    6/5.7    2/2.2  11/10.3
 26:08    9/9.2    3/3.2    8/7.9  14/14.0    6/6.5    3/2.5  12/11.9
29:01P    5/4.8    2/1.7    4/4.1    7/7.3    4/3.4    1/1.3    6/6.2
29:02P    9/8.9    3/3.1    8/7.7  14/13.6    6/6.4    2/2.4  11/11.6
31:01P    9/8.7    3/3.0    8/7.4  14/13.3    6/6.2    2/2.4  12/11.3
32:01P    2/2.5    1/0.9    2/2.1    4/3.8    2/1.8    1/0.7    3/3.2
 32:02  16/16.8    6/5.9  14/14.4  26/25.6  12/12.0    5/4.6  22/21.8
33:01P    1/0.7    0/0.3    1/0.6    2/1.1    0/0.5    0/0.2    1/1.0
68:01P    7/6.6    2/2.3    6/5.7  10/10.1    4/4.7    2/1.8    8/8.6
 68:06  14/14.0    5/4.9  12/12.0  21/21.3  10/10.0    4/3.8  18/18.1
         01:01P   02:01P   02:05P   03:01P   11:01P   23:01P   24:02P
                             [Cols: 1 to 7]
25:01P    0/0.4
26:01P    2/1.8    2/2.3
 26:08    2/2.1    5/5.3    3/3.1
29:01P    1/1.1    3/2.8    3/3.2    1/0.8
29:02P    2/2.0    5/5.2    6/6.0    3/3.1    3/2.9
31:01P    2/2.0    5/5.0    6/5.8    3/3.0    6/5.7    2/2.8
32:01P    1/0.6    1/1.4    2/1.7    1/0.9    2/1.6    1/1.6    0/0.2
 32:02    4/3.8   10/9.7  11/11.2    6/5.9  11/10.9  11/10.6    3/3.0
33:01P    0/0.2    0/0.4    1/0.5    0/0.3    1/0.5    0/0.5    0/0.1
68:01P    2/1.5    4/3.8    5/4.4    2/2.3    4/4.3    4/4.2    1/1.2
 68:06    3/3.2    8/8.1    9/9.4    5/4.9    9/9.1    9/8.9    3/2.5
         25:01P   26:01P    26:08   29:01P   29:02P   31:01P   32:01P
                             [Cols: 8 to 14]
 32:02  10/10.3
33:01P    1/0.9   0/2e-2
68:01P    8/8.1    0/0.4    2/1.6
 68:06  17/17.1    1/0.8    7/6.7    7/7.1
          32:02   33:01P   68:01P    68:06
                             [Cols: 15 to 18]

                          Observed         Expected       Chi-square   DoF   p-value        
------------------------------------------------------------------------------------------
           Common              N/A              N/A             1.05    59  1.0000           
------------------------------------------------------------------------------------------
 Lumped genotypes              N/A              N/A             5e-3     1  0.9420           
------------------------------------------------------------------------------------------
  Common + lumped              N/A              N/A             1.05    59  1.0000           
------------------------------------------------------------------------------------------
  All homozygotes               75            75.71             7e-3     1  0.9348           
------------------------------------------------------------------------------------------
All heterozygotes              927           926.29             5e-4     1  0.9813           
------------------------------------------------------------------------------------------
Common heterozygotes by allele
01:01P                         152           152.25             4e-4        0.9839           
02:01P                          56            56.32             2e-3        0.9658           
02:05P                         132           131.94             3e-5        0.9957           
03:01P                         221           221.06             2e-5        0.9968           
11:01P                         110           111.05             1e-2        0.9205           
23:01P                          43            43.99             0.02        0.8814           
24:02P                         193           191.93             6e-3        0.9386           
25:01P                          38            37.28             0.01        0.9061           
26:01P                          92            91.40             4e-3        0.9501           
26:08                          105           104.85             2e-4        0.9885           
29:01P                          56            56.32             2e-3        0.9658           
29:02P                         102           102.18             3e-4        0.9858           
31:01P                         101            99.50             0.02        0.8803           
32:01P                          30            29.55             7e-3        0.9342           
32:02                          183           182.44             2e-3        0.9667           
33:01P                           9             8.96             2e-4        0.9892           
68:01P                          76            76.81             8e-3        0.9267           
68:06                          155           154.75             4e-4        0.9838           

------------------------------------------------------------------------------------------
Common genotypes
01:01P+01:01P                    7             6.88             2e-3        0.9621           
01:01P+02:05P                   11            11.76             0.05        0.8241           
01:01P+03:01P                   21            20.96             9e-5        0.9925           
01:01P+11:01P                   10             9.77             5e-3        0.9425           
01:01P+24:02P                   18            17.81             2e-3        0.9640           
01:01P+26:01P                    8             7.95             3e-4        0.9864           
01:01P+26:08                     9             9.19             4e-3        0.9488           
01:01P+29:02P                    9             8.95             3e-4        0.9856           
01:01P+31:01P                    9             8.70             0.01        0.9183           
01:01P+32:02                    16            16.82             0.04        0.8424           
01:01P+68:01P                    7             6.63             0.02        0.8847           
01:01P+68:06                    14            14.00             0.00        0.9998           
02:01P+03:01P                    7             7.32             0.01        0.9052           
02:01P+24:02P                    6             6.22             8e-3        0.9289           
02:01P+32:02                     6             5.88             3e-3        0.9590           
02:05P+02:05P                    5             5.03             2e-4        0.9890           
02:05P+03:01P                   18            17.93             3e-4        0.9863           
02:05P+11:01P                    8             8.36             0.02        0.9006           
02:05P+24:02P                   15            15.23             4e-3        0.9521           
02:05P+26:01P                    7             6.80             6e-3        0.9396           
02:05P+26:08                     8             7.87             2e-3        0.9617           
02:05P+29:02P                    8             7.65             0.02        0.9001           
02:05P+31:01P                    8             7.44             0.04        0.8374           
02:05P+32:02                    14            14.38             0.01        0.9193           
02:05P+68:01P                    6             5.67             0.02        0.8893           
02:05P+68:06                    12            11.98             5e-5        0.9942           
03:01P+03:01P                   16            15.97             6e-5        0.9941           
03:01P+11:01P                   14            14.90             0.05        0.8162           
03:01P+23:01P                    5             5.68             0.08        0.7751           
03:01P+24:02P                   27            27.14             8e-4        0.9781           
03:01P+26:01P                   12            12.12             1e-3        0.9726           
03:01P+26:08                    14            14.01             1e-5        0.9971           
03:01P+29:01P                    7             7.32             0.01        0.9052           
03:01P+29:02P                   14            13.63             1e-2        0.9212           
03:01P+31:01P                   14            13.26             0.04        0.8381           
03:01P+32:02                    26            25.63             5e-3        0.9415           
03:01P+68:01P                   10            10.10             1e-3        0.9749           
03:01P+68:06                    21            21.34             5e-3        0.9420           
11:01P+24:02P                   14            12.66             0.14        0.7064           
11:01P+26:01P                    6             5.65             0.02        0.8839           
11:01P+26:08                     6             6.54             0.04        0.8340           
11:01P+29:02P                    6             6.36             0.02        0.8867           
11:01P+31:01P                    6             6.18             5e-3        0.9414           
11:01P+32:02                    12            11.95             2e-4        0.9892           
11:01P+68:06                    10             9.95             2e-4        0.9876           
24:02P+24:02P                   11            11.53             0.02        0.8752           
24:02P+26:01P                   11            10.30             0.05        0.8272           
24:02P+26:08                    12            11.91             7e-4        0.9789           
24:02P+29:01P                    6             6.22             8e-3        0.9289           
24:02P+29:02P                   11            11.59             0.03        0.8631           
24:02P+31:01P                   12            11.26             0.05        0.8267           
24:02P+32:02                    22            21.78             2e-3        0.9622           
24:02P+68:01P                    8             8.58             0.04        0.8423           
24:02P+68:06                    18            18.13             9e-4        0.9754           
26:01P+26:08                     5             5.32             0.02        0.8905           
26:01P+29:02P                    5             5.17             6e-3        0.9391           
26:01P+31:01P                    5             5.03             2e-4        0.9893           
26:01P+32:02                    10             9.72             8e-3        0.9296           
26:01P+68:06                     8             8.10             1e-3        0.9731           
26:08+29:02P                     6             5.98             5e-5        0.9941           
26:08+31:01P                     6             5.82             6e-3        0.9391           
26:08+32:02                     11            11.24             5e-3        0.9420           
26:08+68:06                      9             9.36             0.01        0.9061           
29:01P+32:02                     6             5.88             3e-3        0.9590           
29:02P+31:01P                    6             5.66             0.02        0.8859           
29:02P+32:02                    11            10.94             3e-4        0.9856           
29:02P+68:06                     9             9.11             1e-3        0.9715           
31:01P+32:02                    11            10.64             0.01        0.9112           
31:01P+68:06                     9             8.85             2e-3        0.9611           
32:02+32:02                     10            10.28             8e-3        0.9300           
32:02+68:01P                     8             8.10             1e-3        0.9709           
32:02+68:06                     17            17.12             8e-4        0.9770           
68:01P+68:06                     7             6.75             1e-2        0.9223           
68:06+68:06                      7             7.13             2e-3        0.9624           
            Total              784           785.07
------------------------------------------------------------------------------------------



2. Locus: DRB1
______________

2.1. Allele Counts [DRB1]
-------------------------
Untyped individuals: 11.0
Sample Size (n): 991.0
Allele Count (2n): 1982
Distinct alleles (k): 15

Counts ordered by frequen| Counts ordered by name   
Name   Frequency (Count) | Name   Frequency (Count) 
15:01P 0.18113   359     | 01:01P 0.13017   258     
08:01P 0.14934   296     | 03:01P 0.11907   236     
07:01P 0.14682   291     | 04:01P 0.07921   157     
01:01P 0.13017   258     | 04:03P 0.00252   5       
03:01P 0.11907   236     | 04:04P 0.00252   5       
04:01P 0.07921   157     | 07:01P 0.14682   291     
11:01P 0.07064   140     | 08:01P 0.14934   296     
14:01P 0.04137   82      | 11:01P 0.07064   140     
11:04P 0.03380   67      | 11:03  0.01009   20      
13:01P 0.02422   48      | 11:04P 0.03380   67      
11:03  0.01009   20      | 13:01P 0.02422   48      
13:02P 0.00656   13      | 13:02P 0.00656   13      
04:03P 0.00252   5       | 13:03P 0.00252   5       
04:04P 0.00252   5       | 14:01P 0.04137   82      
13:03P 0.00252   5       | 15:01P 0.18113   359     
Total  1.00000   1982    | Total  1.00000   1982    


2.2. HardyWeinberg [DRB1]
-------------------------
Table of genotypes, format of each cell is: observed/expected.

01:01P  17/16.8
03:01P  31/30.7  14/14.1
04:01P  20/20.4  19/18.7    6/6.2
04:03P    1/0.7    0/0.6    1/0.4   0/6e-3
04:04P    1/0.7    0/0.6    1/0.4   0/1e-2   0/6e-3
07:01P  38/37.9  35/34.6  23/23.1    1/0.7    1/0.7  21/21.4
08:01P  38/38.5  35/35.2  23/23.4    1/0.7    1/0.7  43/43.5  22/22.1
11:01P  18/18.2  17/16.7  11/11.1    0/0.4    0/0.4  21/20.6  21/20.9
 11:03    3/2.6    2/2.4    2/1.6   0/5e-2   0/5e-2    3/2.9    3/3.0
11:04P    9/8.7    8/8.0    5/5.3    0/0.2    0/0.2   10/9.8  10/10.0
13:01P    6/6.2    6/5.7    4/3.8    0/0.1    0/0.1    7/7.0    7/7.2
13:02P    2/1.7    2/1.5    1/1.0   0/3e-2   0/3e-2    2/1.9    2/1.9
13:03P    1/0.7    0/0.6    1/0.4   0/1e-2   0/1e-2    1/0.7    1/0.7
14:01P  10/10.7   10/9.8    6/6.5    0/0.2    0/0.2  12/12.0  12/12.2
15:01P  46/46.7  43/42.7  28/28.4    1/0.9    1/0.9  52/52.7  55/53.6
         01:01P   03:01P   04:01P   04:03P   04:04P   07:01P   08:01P
                             [Cols: 1 to 7]
11:01P    5/4.9
 11:03    1/1.4    0/0.1
11:04P    5/4.7    1/0.7    1/1.1
13:01P    3/3.4    0/0.5    2/1.6    1/0.6
13:02P    1/0.9    0/0.1    0/0.4    0/0.3   0/4e-2
13:03P    0/0.4   0/5e-2    0/0.2    0/0.1   0/3e-2   0/6e-3
14:01P    6/5.8    1/0.8    3/2.8    2/2.0    1/0.5    0/0.2    2/1.7
15:01P  26/25.4    4/3.6  12/12.1    9/8.7    2/2.4    1/0.9  15/14.9
         11:01P    11:03   11:04P   13:01P   13:02P   13:03P   14:01P
                             [Cols: 8 to 14]
15:01P  32/32.5
         15:01P
                             [Cols: 15 to 15]

                          Observed         Expected       Chi-square   DoF   p-value        
------------------------------------------------------------------------------------------
           Common              N/A              N/A             0.34    35  1.0000           
------------------------------------------------------------------------------------------
 Lumped genotypes              N/A              N/A             0.05     1  0.8234           
------------------------------------------------------------------------------------------
  Common + lumped              N/A              N/A             0.39    35  1.0000           
------------------------------------------------------------------------------------------
  All homozygotes              121           121.56             3e-3     1  0.9598           
------------------------------------------------------------------------------------------
All heterozygotes              870           869.44             4e-4     1  0.9850           
------------------------------------------------------------------------------------------
Common heterozygotes by allele
01:01P                         224           224.42             8e-4        0.9779           
03:01P                         208           207.90             5e-5        0.9944           
04:01P                         145           144.56             1e-3        0.9710           
07:01P                         249           248.27             2e-3        0.9633           
08:01P                         252           251.79             2e-4        0.9896           
11:01P                         130           130.11             1e-4        0.9922           
11:03                           20            19.80             2e-3        0.9638           
11:04P                          65            64.74             1e-3        0.9737           
13:01P                          46            46.84             0.01        0.9026           
13:02P                          13            12.91             6e-4        0.9811           
14:01P                          78            78.61             5e-3        0.9454           
15:01P                         295           293.97             4e-3        0.9523           

------------------------------------------------------------------------------------------
Common genotypes
01:01P+01:01P                   17            16.79             3e-3        0.9595           
01:01P+03:01P                   31            30.72             3e-3        0.9598           
01:01P+04:01P                   20            20.44             9e-3        0.9230           
01:01P+07:01P                   38            37.88             4e-4        0.9844           
01:01P+08:01P                   38            38.53             7e-3        0.9319           
01:01P+11:01P                   18            18.22             3e-3        0.9581           
01:01P+11:04P                    9             8.72             9e-3        0.9249           
01:01P+13:01P                    6             6.25             1e-2        0.9209           
01:01P+14:01P                   10            10.67             0.04        0.8365           
01:01P+15:01P                   46            46.73             0.01        0.9148           
03:01P+03:01P                   14            14.05             2e-4        0.9893           
03:01P+04:01P                   19            18.69             5e-3        0.9436           
03:01P+07:01P                   35            34.65             4e-3        0.9526           
03:01P+08:01P                   35            35.25             2e-3        0.9671           
03:01P+11:01P                   17            16.67             7e-3        0.9356           
03:01P+11:04P                    8             7.98             6e-5        0.9937           
03:01P+13:01P                    6             5.72             0.01        0.9053           
03:01P+14:01P                   10             9.76             6e-3        0.9398           
03:01P+15:01P                   43            42.75             2e-3        0.9691           
04:01P+04:01P                    6             6.22             8e-3        0.9303           
04:01P+07:01P                   23            23.05             1e-4        0.9915           
04:01P+08:01P                   23            23.45             9e-3        0.9264           
04:01P+11:01P                   11            11.09             7e-4        0.9785           
04:01P+11:04P                    5             5.31             0.02        0.8939           
04:01P+14:01P                    6             6.50             0.04        0.8459           
04:01P+15:01P                   28            28.44             7e-3        0.9346           
07:01P+07:01P                   21            21.36             6e-3        0.9375           
07:01P+08:01P                   43            43.46             5e-3        0.9445           
07:01P+11:01P                   21            20.55             1e-2        0.9218           
07:01P+11:04P                   10             9.84             3e-3        0.9586           
07:01P+13:01P                    7             7.05             3e-4        0.9857           
07:01P+14:01P                   12            12.04             1e-4        0.9910           
07:01P+15:01P                   52            52.71             1e-2        0.9222           
08:01P+08:01P                   22            22.10             5e-4        0.9825           
08:01P+11:01P                   21            20.91             4e-4        0.9840           
08:01P+11:04P                   10            10.01             4e-6        0.9985           
08:01P+13:01P                    7             7.17             4e-3        0.9498           
08:01P+14:01P                   12            12.25             5e-3        0.9439           
08:01P+15:01P                   55            53.61             0.04        0.8499           
11:01P+14:01P                    6             5.79             7e-3        0.9312           
11:01P+15:01P                   26            25.36             0.02        0.8986           
11:04P+15:01P                   12            12.14             2e-3        0.9689           
13:01P+15:01P                    9             8.69             0.01        0.9174           
14:01P+15:01P                   15            14.85             1e-3        0.9695           
15:01P+15:01P                   32            32.51             8e-3        0.9283           
            Total              915           916.92
------------------------------------------------------------------------------------------



3. Locus: DQB1
______________

3.1. Allele Counts [DQB1]
-------------------------
Untyped individuals: 0.0
Sample Size (n): 1002.0
Allele Count (2n): 2004
Distinct alleles (k): 14

Counts ordered by frequency| Counts ordered by name     
Name     Frequency (Count) | Name     Frequency (Count) 
06:02P   0.12176   244     | 02:01P   0.11527   231     
02:01P   0.11527   231     | 03:01P   0.10978   220     
03:01P   0.10978   220     | 03:02:12 0.09381   188     
05:03P   0.09631   193     | 03:02P   0.06487   130     
03:02:12 0.09381   188     | 03:03P   0.08982   180     
05:01P   0.09381   188     | 04:01P   0.03992   80      
06:05P   0.09381   188     | 04:02:01 0.00399   8       
03:03P   0.08982   180     | 05:01P   0.09381   188     
03:02P   0.06487   130     | 05:02P   0.03643   73      
04:01P   0.03992   80      | 05:03P   0.09631   193     
05:02P   0.03643   73      | 06:01P   0.00449   9       
06:03P   0.03593   72      | 06:02P   0.12176   244     
06:01P   0.00449   9       | 06:03P   0.03593   72      
04:02:01 0.00399   8       | 06:05P   0.09381   188     
Total    1.00000   2004    | Total    1.00000   2004    


3.2. HardyWeinberg [DQB1]
-------------------------
Table of genotypes, format of each cell is: observed/expected.

  02:01P  13/13.3
  03:01P  26/25.4  12/12.1
03:02:12  22/21.7  21/20.6   18/8.8
  03:02P  15/15.0  14/14.3  12/12.2    4/4.2
  03:03P  20/20.7  20/19.8  17/16.9  12/11.7    8/8.1
  04:01P    9/9.2    9/8.8    7/7.5    5/5.2    7/7.2    2/1.6
04:02:01    0/0.9    0/0.9    0/0.8    0/0.5    0/0.7    0/0.3   0/2e-2
  05:01P  22/21.7  21/20.6  18/17.6  13/12.2  17/16.9    8/7.5    0/0.8
  05:02P    9/8.4    8/8.0    7/6.8    5/4.7    7/6.6    3/2.9    0/0.3
  05:03P  23/22.2  21/21.2   0/18.1  13/12.5  18/17.3    8/7.7    0/0.8
  06:01P    1/1.0    1/1.0    1/0.8    1/0.6    1/0.8    0/0.4   0/4e-2
  06:02P  28/28.1  27/26.8  23/22.9  16/15.8  22/21.9   10/9.7    0/1.0
  06:03P    8/8.3    7/7.9    6/6.8    4/4.7    6/6.5    3/2.9    8/0.3
  06:05P  22/21.7  21/20.6  18/17.6  12/12.2  17/16.9    7/7.5    0/0.8
           02:01P   03:01P 03:02:12   03:02P   03:03P   04:01P 04:02:01
                             [Cols: 1 to 7]
  05:01P    8/8.8
  05:02P    7/6.8    1/1.3
  05:03P  18/18.1    7/7.0   39/9.3
  06:01P    1/0.8    0/0.3    1/0.9   0/2e-2
  06:02P  23/22.9    9/8.9   0/23.5    1/1.1  27/14.9
  06:03P    6/6.8    2/2.6    6/6.9    0/0.3    8/8.8    1/1.3
  06:05P  18/17.6    7/6.8   0/18.1    1/0.8  23/22.9    6/6.8   18/8.8
           05:01P   05:02P   05:03P   06:01P   06:02P   06:03P   06:05P
                             [Cols: 8 to 14]

                          Observed         Expected       Chi-square   DoF   p-value        
------------------------------------------------------------------------------------------
           Common              N/A              N/A           184.87    57  0.0000*****      
------------------------------------------------------------------------------------------
 Lumped genotypes              N/A              N/A             0.03     1  0.8573           
------------------------------------------------------------------------------------------
  Common + lumped              N/A              N/A           184.91    57  0.0000*****      
------------------------------------------------------------------------------------------
  All homozygotes              151            92.55            36.92     1  0.0000*****      
------------------------------------------------------------------------------------------
All heterozygotes              851           909.45             3.76     1  0.0526           
------------------------------------------------------------------------------------------
Common heterozygotes by allele
02:01P                         205           204.37             2e-3        0.9650           
03:01P                         196           195.85             1e-4        0.9914           
03:02:12                       152           170.36             1.98        0.1595           
03:02P                         122           121.57             2e-3        0.9687           
03:03P                         164           163.83             2e-4        0.9895           
04:01P                          76            76.81             8e-3        0.9267           
04:02:01                         8             7.97             1e-4        0.9910           
05:01P                         172           170.36             0.02        0.9002           
05:02P                          71            70.34             6e-3        0.9374           
05:03P                         115           174.41            20.24        7e-6*****        
06:01P                           9             8.96             2e-4        0.9892           
06:02P                         190           214.29             2.75        0.0970           
06:03P                          70            69.41             5e-3        0.9438           
06:05P                         152           170.36             1.98        0.1595           

------------------------------------------------------------------------------------------
Common genotypes
02:01P+02:01P                   13            13.31             7e-3        0.9315           
02:01P+03:01P                   26            25.36             0.02        0.8988           
02:01P+03:02:12                 22            21.67             5e-3        0.9436           
02:01P+03:02P                   15            14.99             2e-5        0.9969           
02:01P+03:03P                   20            20.75             0.03        0.8695           
02:01P+04:01P                    9             9.22             5e-3        0.9418           
02:01P+05:01P                   22            21.67             5e-3        0.9436           
02:01P+05:02P                    9             8.41             0.04        0.8401           
02:01P+05:03P                   23            22.25             0.03        0.8732           
02:01P+06:02P                   28            28.13             6e-4        0.9811           
02:01P+06:03P                    8             8.30             0.01        0.9172           
02:01P+06:05P                   22            21.67             5e-3        0.9436           
03:01P+03:01P                   12            12.08             5e-4        0.9826           
03:01P+03:02:12                 21            20.64             6e-3        0.9366           
03:01P+03:02P                   14            14.27             5e-3        0.9427           
03:01P+03:03P                   20            19.76             3e-3        0.9570           
03:01P+04:01P                    9             8.78             5e-3        0.9415           
03:01P+05:01P                   21            20.64             6e-3        0.9366           
03:01P+05:02P                    8             8.01             2e-5        0.9961           
03:01P+05:03P                   21            21.19             2e-3        0.9675           
03:01P+06:02P                   27            26.79             2e-3        0.9671           
03:01P+06:03P                    7             7.90             0.10        0.7477           
03:01P+06:05P                   21            20.64             6e-3        0.9366           
03:02:12+03:02:12               18             8.82             9.56        0.0020**         
03:02:12+03:02P                 12            12.20             3e-3        0.9553           
03:02:12+03:03P                 17            16.89             8e-4        0.9779           
03:02:12+04:01P                  7             7.50             0.03        0.8538           
03:02:12+05:01P                 18            17.64             7e-3        0.9311           
03:02:12+05:02P                  7             6.85             3e-3        0.9538           
03:02:12+05:03P                  0            18.11            18.11        2.1e-5****       
03:02:12+06:02P                 23            22.89             5e-4        0.9817           
03:02:12+06:03P                  6             6.75             0.08        0.7716           
03:02:12+06:05P                 18            17.64             7e-3        0.9311           
03:02P+03:03P                   12            11.68             9e-3        0.9246           
03:02P+04:01P                    5             5.19             7e-3        0.9337           
03:02P+05:01P                   13            12.20             0.05        0.8178           
03:02P+05:03P                   13            12.52             0.02        0.8921           
03:02P+06:02P                   16            15.83             2e-3        0.9656           
03:02P+06:05P                   12            12.20             3e-3        0.9553           
03:03P+03:03P                    8             8.08             9e-4        0.9765           
03:03P+04:01P                    7             7.19             5e-3        0.9448           
03:03P+05:01P                   17            16.89             8e-4        0.9779           
03:03P+05:02P                    7             6.56             0.03        0.8626           
03:03P+05:03P                   18            17.34             0.03        0.8732           
03:03P+06:02P                   22            21.92             3e-4        0.9857           
03:03P+06:03P                    6             6.47             0.03        0.8543           
03:03P+06:05P                   17            16.89             8e-4        0.9779           
04:01P+05:01P                    8             7.50             0.03        0.8566           
04:01P+05:03P                    8             7.70             0.01        0.9152           
04:01P+06:02P                   10             9.74             7e-3        0.9337           
04:01P+06:05P                    7             7.50             0.03        0.8538           
05:01P+05:01P                    8             8.82             0.08        0.7829           
05:01P+05:02P                    7             6.85             3e-3        0.9538           
05:01P+05:03P                   18            18.11             6e-4        0.9802           
05:01P+06:02P                   23            22.89             5e-4        0.9817           
05:01P+06:03P                    6             6.75             0.08        0.7716           
05:01P+06:05P                   18            17.64             7e-3        0.9311           
05:02P+05:03P                    7             7.03             1e-4        0.9908           
05:02P+06:02P                    9             8.89             1e-3        0.9701           
05:02P+06:05P                    7             6.85             3e-3        0.9538           
05:03P+05:03P                   39             9.29            94.95        0.0000*****      
05:03P+06:02P                    0            23.50            23.50        1e-6*****        
05:03P+06:03P                    6             6.93             0.13        0.7228           
05:03P+06:05P                    0            18.11            18.11        2.1e-5****       
06:02P+06:02P                   27            14.85             9.93        0.0016**         
06:02P+06:03P                    8             8.77             0.07        0.7957           
06:02P+06:05P                   23            22.89             5e-4        0.9817           
06:03P+06:05P                    6             6.75             0.08        0.7716           
06:05P+06:05P                   18             8.82             9.56        0.0020**         
            Total              960           958.82
------------------------------------------------------------------------------------------



