biopandas>=0.4.1
biopython
bioservices>=1.10.0
deepdiff
loguru
matplotlib>=3.4.3
multipledispatch
networkx
numpy
pandas
plotly
pydantic
rich
rich-click
seaborn
pyyaml<6.*,>=5.1
scikit-learn
scipy
tqdm
typing_extensions
wget
xarray

[all]
pre-commit
nbval
pytest-xdist
flake8
pandoc
pydocstyle
pytest
black
pytest-cov
pycodestyle
hypothesis
nbstripout
isort
interrogate

[dev]
black
flake8
hypothesis
interrogate
isort
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist

[extras]
black
flake8
hypothesis
interrogate
isort
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
