Metadata-Version: 2.1
Name: pyjamas-rfglab
Version: 2025.5.0
Summary: PyJAMAS is Just A More Awesome SIESTA
Home-page: https://bitbucket.org/rfg_lab/pyjamas
Author: Rodrigo Fernandez-Gonzalez
Author-email: rodrigo.fernandez.gonzalez@utoronto.ca
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Requires-Python: >=3.10, <3.12
Description-Content-Type: text/markdown
Requires-Dist: ipywidgets>=8.0.4
Requires-Dist: joblib>=1.2.0
Requires-Dist: lxml>=4.9.2
Requires-Dist: matplotlib>=3.7.1
Requires-Dist: nbformat>=5.7.0
Requires-Dist: networkx>=2.8.4
Requires-Dist: numba==0.60.0
Requires-Dist: numpy==1.26.4
Requires-Dist: opencv-python-headless==4.6.0.66
Requires-Dist: pandas==2.1.4
Requires-Dist: pyqt6==6.8.0
Requires-Dist: scikit-image==0.24.0
Requires-Dist: scikit-learn>=1.2.2
Requires-Dist: scipy>=1.10.1
Requires-Dist: seaborn>=0.13.0
Requires-Dist: setuptools>=67.8.0
Requires-Dist: shapely>=2.0.1
Requires-Dist: tensorflow==2.15.0

![Logo](./docs/images/paperfigure_v6.png)
[![GPLv3 License](https://img.shields.io/badge/License-GPL%20v3-yellow.svg)](https://opensource.org/licenses/GPL-3.0)

# PyJAMAS

[**Py**JAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/) is **J**ust **A** **M**ore **A**wesome **S**iesta.

## Documentation and installation instructions

You can find the official [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/) documentation, with detailed
installation instructions, [**here**](https://pyjamas.readthedocs.io).

## Citing PyJAMAS

If you use [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/), please cite:

Fernandez-Gonzalez R, Balaghi N, Wang K, Hawkins R, Rothenberg K, McFaul C, Schimmer C, Ly M, do Carmo A, Scepanovic G,
Erdemci-Tandogan G, Castle V. **PyJAMAS: open-source, multimodal segmentation and analysis of microscopy images**. *
Bioinformatics*. 2021 Aug 13:btab589. doi: 10.1093/bioinformatics/btab589.

## Sponsors

We are grateful for the generous support from the following agencies and institutions, which contribute to the
development and maintenance of [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/):

![Sponsors](./docs/images/sponsors.png)
