CHANGELOG.md
CODEOWNERS
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
bigwig_loader/__init__.py
bigwig_loader/_version.py
bigwig_loader/batch.py
bigwig_loader/batch_processor.py
bigwig_loader/bigwig.py
bigwig_loader/collection.py
bigwig_loader/cupy_functions.py
bigwig_loader/dataset.py
bigwig_loader/decompressor.py
bigwig_loader/download_example_data.py
bigwig_loader/functional.py
bigwig_loader/input_generator.py
bigwig_loader/intervals_to_values.py
bigwig_loader/memory_bank.py
bigwig_loader/merge_intervals.pyx
bigwig_loader/parser.py
bigwig_loader/path.py
bigwig_loader/pytorch.py
bigwig_loader/searchsorted.py
bigwig_loader/settings.py
bigwig_loader/store.py
bigwig_loader/streamed_dataset.py
bigwig_loader/subtract_intervals.pyx
bigwig_loader/util.py
bigwig_loader/sampler/__init__.py
bigwig_loader/sampler/genome_sampler.py
bigwig_loader/sampler/position_sampler.py
bigwig_loader/sampler/track_sampler.py
cuda_kernels/intervals_to_values.cu
example_data/some_intervals.tsv
example_data/some_positions.tsv
tests/conftest.py
tests/test_against_pybigwig.py
tests/test_collection.py
tests/test_cupy_functions.py
tests/test_dataset.py
tests/test_file_path_interpretation.py
tests/test_intervals_to_values.py
tests/test_intervals_to_values_window_function.py
tests/test_merge_intervals.py
tests/test_path.py
tests/test_position_sampler.py
tests/test_pytorch_dataset.py
tests/test_searchsorted.py
tests/test_streamed_dataset.py
tests/test_subtract_intervals.py
tests/test_track_sampler.py
tests/test_window_function.py