Metadata-Version: 2.1
Name: torchtree
Version: 1.0.0
Summary: Phylogenetic inference with pytorch
Home-page: https://github.com/4ment/torchtree
Author: Mathieu Fourment
Author-email: mathieu.fourment@uts.edu.au
License: GPL3
Description: # torchtree
        
        [![Python package](https://github.com/4ment/torchtree/actions/workflows/python-package.yml/badge.svg)](https://github.com/4ment/torchtree/actions/workflows/python-package.yml)
        
        ## Installation
        
        ### Get the torchtree source
        ```bash
        git clone https://github.com/4ment/torchtree
        cd torchtree
        ```
        
        ### Install dependencies
        
        Installing dependencies using Anaconda
        ```bash
        conda env create -f environment.yml
        conda activate torchtree
        ```
        
        or using pip
        ```bash
        pip install -r requirements.txt
        ```
        
        ### Install torchtree
        ```bash
        python setup.py install
        ```
        
        ### Check install
        ```bash
        torchtree --help
        ```
        
        ### Quick start
        ```bash
        torchtree examples/advi/fluA.json
        ```
Keywords: phylogenetics,variational,Bayes,pytorch
Platform: UNKNOWN
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.6
Provides-Extra: dev
Provides-Extra: test
