LICENSE.txt
MANIFEST.in
README.md
requirements.txt
setup.py
mechanoChemML/mechanoChemML.egg-info/PKG-INFO
mechanoChemML/mechanoChemML.egg-info/SOURCES.txt
mechanoChemML/mechanoChemML.egg-info/dependency_links.txt
mechanoChemML/mechanoChemML.egg-info/requires.txt
mechanoChemML/mechanoChemML.egg-info/top_level.txt
mechanoChemML/src/LeastR.py
mechanoChemML/src/__init__.py
mechanoChemML/src/gradient_layer.py
mechanoChemML/src/hparameters_cnn_grid.py
mechanoChemML/src/hparameters_dnn_grid.py
mechanoChemML/src/idnn.py
mechanoChemML/src/kbnn.py
mechanoChemML/src/kfold_train.py
mechanoChemML/src/nn_models.py
mechanoChemML/src/pde_layers.py
mechanoChemML/src/stepwiseRegression.py
mechanoChemML/src/systemID.py
mechanoChemML/src/transform_layer.py
mechanoChemML/testing/__init__.py
mechanoChemML/testing/idnn_convexity_test.py
mechanoChemML/third_party/dns_wrapper/__init__.py
mechanoChemML/third_party/dns_wrapper/available_dns_modules.py
mechanoChemML/third_party/dns_wrapper/dns_wrapper.py
mechanoChemML/workflows/__init__.py
mechanoChemML/workflows/active_learning/LSF_manager.py
mechanoChemML/workflows/active_learning/__init__.py
mechanoChemML/workflows/active_learning/slurm_manager.py
mechanoChemML/workflows/active_learning/Example1_NiAl/CASM_surrogate.py
mechanoChemML/workflows/active_learning/Example1_NiAl/CASM_wrapper.py
mechanoChemML/workflows/active_learning/Example1_NiAl/NiAl_free_energy.ini
mechanoChemML/workflows/active_learning/Example1_NiAl/NiAl_test.ini
mechanoChemML/workflows/active_learning/Example1_NiAl/__init__.py
mechanoChemML/workflows/active_learning/Example1_NiAl/active_learning.py
mechanoChemML/workflows/active_learning/Example1_NiAl/hp_search.py
mechanoChemML/workflows/active_learning/Example1_NiAl/idnn_test.h5
mechanoChemML/workflows/active_learning/Example1_NiAl/main.py
mechanoChemML/workflows/active_learning/Example1_NiAl/main_test.py
mechanoChemML/workflows/active_learning/Example1_NiAl/monte_settings.json.tmpl
mechanoChemML/workflows/active_learning/Example1_NiAl/optimize_hparameters.py
mechanoChemML/workflows/active_learning/Example1_NiAl/save_weights.py
mechanoChemML/workflows/active_learning/Example1_NiAl/submit.lsf
mechanoChemML/workflows/active_learning/Example1_NiAl/submit_test.lsf
mechanoChemML/workflows/active_learning/Example1_NiAl/submit_test.slrm
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/bias_0.txt
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/bias_1.txt
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/bias_2.txt
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/weights_0.txt
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/weights_1.txt
mechanoChemML/workflows/active_learning/Example1_NiAl/test_weights/weights_2.txt
mechanoChemML/workflows/active_learning/Example2_LCO/CASM_surrogate.py
mechanoChemML/workflows/active_learning/Example2_LCO/CASM_wrapper.py
mechanoChemML/workflows/active_learning/Example2_LCO/LCO_free_energy.ini
mechanoChemML/workflows/active_learning/Example2_LCO/LCO_test.ini
mechanoChemML/workflows/active_learning/Example2_LCO/Q_LCO.txt
mechanoChemML/workflows/active_learning/Example2_LCO/__init__.py
mechanoChemML/workflows/active_learning/Example2_LCO/active_learningLCO.py
mechanoChemML/workflows/active_learning/Example2_LCO/disordered.json
mechanoChemML/workflows/active_learning/Example2_LCO/hitandrun.py
mechanoChemML/workflows/active_learning/Example2_LCO/hp_search.py
mechanoChemML/workflows/active_learning/Example2_LCO/idnn_test.h5
mechanoChemML/workflows/active_learning/Example2_LCO/main.py
mechanoChemML/workflows/active_learning/Example2_LCO/main_test.py
mechanoChemML/workflows/active_learning/Example2_LCO/monte_settings.json.tmpl
mechanoChemML/workflows/active_learning/Example2_LCO/monte_settings_test.json.tmpl
mechanoChemML/workflows/active_learning/Example2_LCO/save_weights.py
mechanoChemML/workflows/active_learning/Example2_LCO/submit.slrm
mechanoChemML/workflows/active_learning/Example2_LCO/submit_test.slrm
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/bias_0.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/bias_1.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/bias_2.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/bias_3.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/weights_0.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/weights_1.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/weights_2.txt
mechanoChemML/workflows/active_learning/Example2_LCO/test_weights/weights_3.txt
mechanoChemML/workflows/multi_resolution_learning/__init__.py
mechanoChemML/workflows/multi_resolution_learning/mrnn_models.py
mechanoChemML/workflows/multi_resolution_learning/mrnn_utility.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/data/_home_xiaoxuan_comet_quench-20191012-60x60-c_large_8data.csv
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/data/home_xiaoxuan_RVE-data_sim-data-restart_home_xiaoxuan_comet_quench-20191012-60x60-c_large_8_data_restart.csv
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step1_hyper_parameter_search_main_feature/dnn-free-energy-1dns.ini
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step1_hyper_parameter_search_main_feature/hyper_parameter_search.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step2_final_dnn_main_feature/dnn-free-energy-1dns-final.ini
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step2_final_dnn_main_feature/dnn_1dns_final.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step2_final_dnn_main_feature/plot_data_and_history.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step2_final_dnn_main_feature/saved_weight/cp-10000.ckpt.index
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step3_hyper_parameter_search_mrnn_detail_feature/hyper_parameter_search.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step3_hyper_parameter_search_mrnn_detail_feature/kbnn-load-dnn-1-frame-hyperparameter-search-comet.ini
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step4_final_mrnn_no_penalize_P/kbnn-load-dnn-1-frame.ini
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step4_final_mrnn_no_penalize_P/kbnn_1_frame_dnn.py
mechanoChemML/workflows/multi_resolution_learning/Example1_elasticity_microstructures/mrnn-1-microstructure-dnn/step4_final_mrnn_no_penalize_P/plot_data_and_history_kbnn_P.py
mechanoChemML/workflows/pde_solver/__init__.py
mechanoChemML/workflows/pde_solver/pde_system_diffusion_steady_state.py
mechanoChemML/workflows/pde_solver/pde_system_elasticity_linear.py
mechanoChemML/workflows/pde_solver/pde_system_elasticity_nonlinear.py
mechanoChemML/workflows/pde_solver/pde_utility.py
mechanoChemML/workflows/pde_solver/pde_workflow_steady_state.py
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/main.py
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/octagon-32x32-bnn.ini
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/octagon-32x32-cnn.ini
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/data/octagon-32x32/DNS/np-features.npy
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/data/octagon-32x32/DNS/np-labels.npy
mechanoChemML/workflows/pde_solver/Example1_diffusion_steady_state/data/octagon-32x32/DNS/output-1.vtk
mechanoChemML/workflows/pde_solver/Example2_linear_elasticity/main.py
mechanoChemML/workflows/pde_solver/Example3_nonlinear_elasticity/main.py
mechanoChemML/workflows/systemID/__init__.py
mechanoChemML/workflows/systemID/Example1_pattern_forming/__init__.py
mechanoChemML/workflows/systemID/Example1_pattern_forming/config_Example1.ini
mechanoChemML/workflows/systemID/Example1_pattern_forming/forward_model.py
mechanoChemML/workflows/systemID/Example1_pattern_forming/generate_basis.py
mechanoChemML/workflows/systemID/Example1_pattern_forming/main.py
mechanoChemML/workflows/systemID/Example2_soft_materials/__init__.py
mechanoChemML/workflows/systemID/Example2_soft_materials/config_Example2.ini
mechanoChemML/workflows/systemID/Example2_soft_materials/forward_model.py
mechanoChemML/workflows/systemID/Example2_soft_materials/generate_basis.py
mechanoChemML/workflows/systemID/Example2_soft_materials/main.py
mechanoChemML/workflows/systemID/Example3_polynomial/__init__.py
mechanoChemML/workflows/systemID/Example3_polynomial/config_Example3.ini
mechanoChemML/workflows/systemID/Example3_polynomial/main.py
mechanoChemML/workflows/systemID/datasets/Turing_system_data1.h5
mechanoChemML/workflows/systemID/datasets/polynomial.h5