LICENSE
MANIFEST.in
README.md
droptables.py
master-test.sh
requirements.txt
setup.py
time-wildcards.sh
update_load.sh
update_query.sh
geminicassandra/GeminiQuery.py
geminicassandra/__init__.py
geminicassandra/anno_info.py
geminicassandra/annotations.py
geminicassandra/compression.py
geminicassandra/config.py
geminicassandra/database_cassandra.py
geminicassandra/dgidb.py
geminicassandra/func_impact.py
geminicassandra/gemini_amend.py
geminicassandra/gemini_annotate.py
geminicassandra/gemini_browser.py
geminicassandra/gemini_constants.py
geminicassandra/gemini_dbinfo.py
geminicassandra/gemini_load.py
geminicassandra/gemini_load_chunk.py
geminicassandra/gemini_main.py
geminicassandra/gemini_plot.py
geminicassandra/gemini_query.py
geminicassandra/gemini_region.py
geminicassandra/gemini_stats.py
geminicassandra/gemini_subjects.py
geminicassandra/gemini_update.py
geminicassandra/gemini_utils.py
geminicassandra/gene_table.py
geminicassandra/infotag.py
geminicassandra/install-data.py
geminicassandra/ped.py
geminicassandra/popgen.py
geminicassandra/query_expressions.py
geminicassandra/severe_impact.py
geminicassandra/snpEff.py
geminicassandra/sql.py
geminicassandra/sql_extended.py
geminicassandra/sql_utils.py
geminicassandra/stats.py
geminicassandra/structural_variants.py
geminicassandra/table_schemes.py
geminicassandra/vep.py
geminicassandra/version.py
geminicassandra.egg-info/PKG-INFO
geminicassandra.egg-info/SOURCES.txt
geminicassandra.egg-info/dependency_links.txt
geminicassandra.egg-info/not-zip-safe
geminicassandra.egg-info/requires.txt
geminicassandra.egg-info/top_level.txt
geminicassandra/data/__init__.py
geminicassandra/scripts/__init__.py
geminicassandra/scripts/gemini_install.py
geminicassandra/scripts/geminicassandra
test/ALL.wgs.phase1_release_v3.20101123.snps_indels_sv.sites.snippet.snpEff.vcf
test/ALL.wgs.phase1_release_v3.20101123.snps_indels_sv.sites.snippet.vcf
test/cassandra-test-query.sh
test/cassandra-test-setup.sh
test/data-setup.sh
test/exp
test/obs
test/test-clinvar.sh
test/test-columns.sh
test/test-exac.sh
test/test-genome.sh
test/test-genotypes.sh
test/test-load.sh
test/test-query-multicore.sh
test/test-query.sh
test/test-wildcards-multicore.sh
test/test-wildcards.sh
test/test.auto_dom.no_parents.2.ped
test/test.auto_dom.no_parents.2.vcf
test/test.auto_dom.no_parents.3.ped
test/test.auto_dom.no_parents.3.vcf
test/test.auto_dom.no_parents.4.ped
test/test.auto_dom.no_parents.4.vcf
test/test.auto_dom.no_parents.5.ped
test/test.auto_dom.no_parents.5.vcf
test/test.auto_dom.no_parents.ped
test/test.auto_dom.no_parents.vcf
test/test.auto_dom.ped
test/test.auto_dom.vcf
test/test.auto_rec.no_parents.2.ped
test/test.auto_rec.no_parents.2.vcf
test/test.auto_rec.no_parents.3.ped
test/test.auto_rec.no_parents.3.vcf
test/test.auto_rec.no_parents.4.ped
test/test.auto_rec.no_parents.4.vcf
test/test.auto_rec.no_parents.5.ped
test/test.auto_rec.no_parents.5.vcf
test/test.auto_rec.no_parents.ped
test/test.auto_rec.no_parents.vcf
test/test.auto_rec.ped
test/test.auto_rec.vcf
test/test.burden.ped
test/test.burden.vcf
test/test.cadd.vcf
test/test.clinvar.vcf
test/test.comp_het.2.vcf
test/test.comp_het.3.vcf
test/test.comp_het.ped
test/test.comp_het.vcf
test/test.cosmic.vcf
test/test.de_novo.affected.and.unaffected.ped
test/test.de_novo.affected.and.unaffected.vcf
test/test.de_novo.ped
test/test.de_novo.vcf
test/test.exac.vcf
test/test.exac.vcf.gz
test/test.exac.vcf.gz.gbi
test/test.family.vcf
test/test.fusions.ped
test/test.fusions.vcf
test/test.passonly.vcf
test/test.query.vcf
test/test.query.vcf.gz
test/test.query.vcf.gz.gbi
test/test.region.vep.vcf
test/test.roh.vcf
test/test.snpeff.vcf
test/test.snpeff.vcf.gz
test/test.snpeff.vcf.gz.gbi
test/test.somatic.ped
test/test.somatic.vcf
test/test.vcf_id.snpeff.vcf
test/test.vcf_id.snpeff.vcf.gz
test/test.vcf_id.snpeff.vcf.gz.gbi
test/test1.snpeff.vcf
test/test2.snpeff.vcf
test/test2.snpeff.vcf.gz
test/test2.snpeff.vcf.gz.gbi
test/test3.snpeff.vcf
test/test3.snpeff.vcf.gz
test/test3.snpeff.vcf.gz.gbi
test/test4.snpeff.ped
test/test4.vep.snpeff.vcf
test/test4.vep.snpeff.vcf.gz
test/test4.vep.snpeff.vcf.gz.gbi
test/test5.vep.snpeff.vcf
test/test_amend_sample.ped
test/test_extended_ped.ped
test/loading_logs/21435.csv
test/loading_logs/21438.csv
test/loading_logs/21441.csv
test/loading_logs/21677.csv
test/loading_logs/21680.csv
test/loading_logs/21683.csv
test/loading_logs/22083.csv
test/loading_logs/22086.csv
test/loading_logs/22089.csv
test/loading_logs/22373.csv
test/loading_logs/22376.csv
test/loading_logs/22379.csv
test/loading_logs/22503.csv
test/loading_logs/22506.csv
test/loading_logs/22509.csv
test/loading_logs/22761.csv
test/loading_logs/22764.csv
test/loading_logs/22767.csv
test/loading_logs/23000.csv
test/loading_logs/23003.csv
test/loading_logs/23006.csv
test/loading_logs/23079.csv
test/loading_logs/23082.csv
test/loading_logs/23085.csv
test/loading_logs/27742.csv
test/loading_logs/27745.csv
test/loading_logs/27748.csv
test/loading_logs/27837.csv
test/loading_logs/27840.csv
test/loading_logs/27843.csv
test/loading_logs/27908.csv
test/loading_logs/27911.csv
test/loading_logs/27914.csv
test/loading_logs/27978.csv
test/loading_logs/27981.csv
test/loading_logs/27984.csv
test/loading_logs/28050.csv
test/loading_logs/28053.csv
test/loading_logs/28056.csv
test/loading_logs/28129.csv
test/loading_logs/28132.csv
test/loading_logs/28135.csv
test/loading_logs/28242.csv
test/loading_logs/28245.csv
test/loading_logs/28248.csv
test/loading_logs/28294.csv
test/loading_logs/28334.csv
test/loading_logs/28376.csv
test/loading_logs/28379.csv
test/loading_logs/28382.csv
test/loading_logs/28428.csv
test/loading_logs/29492.csv
test/loading_logs/29566.csv
test/loading_logs/29670.csv
test/loading_logs/29837.csv
test/loading_logs/3515.csv
test/loading_logs/3518.csv
test/loading_logs/3521.csv
test/loading_logs/3607.csv
test/loading_logs/3610.csv
test/loading_logs/3613.csv
test/loading_logs/3921.csv
test/loading_logs/3924.csv
test/loading_logs/3927.csv