Crimson Test Cases
==================

+---------------------------------------------------+---------------------------------------------+-------------------+
| File name                                         | Program                                     | Version           |
+===================================================+=============================================+===================+
| fastqc_v0101_01.txt                               | FastQC                                      | 0.10.1            |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_alignment_summary_v1124_01.txt             | Picard CollectAlignmentSummaryMetrics       | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_insert_size_v1124_01.txt                   | Picard CollectInsertSizeMetrics             | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_library_complexity_v1124_01.txt            | Picard EstimateLibraryComplexity            | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_mark_duplicates_v1124_01.txt               | Picard MarkDuplicates                       | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_rna_seq_v1124_01.txt                       | Picard CollectRnaSeqMetrics                 | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| picard_wgs_v1124_01.txt                           | Picard CollectWgsMetrics                    | 1.124             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| samtools_flagstat_v0119.txt                       | samtools flagstat                           | 0.1.19            |
+---------------------------------------------------+---------------------------------------------+-------------------+
| samtools_flagstat_v11.txt                         | samtools flagstat                           | 1.1               |
+---------------------------------------------------+---------------------------------------------+-------------------+
| star_fusion_v060_01.txt                           | STAR-Fusion                                 | 0.6.0             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| star_fusion_v060_02.txt                           | STAR-Fusion                                 | 0.6.0             |
+---------------------------------------------------+---------------------------------------------+-------------------+
| vep_v77_01.txt                                    | Variant Effect Predictor                    | 77                |
+---------------------------------------------------+---------------------------------------------+-------------------+
